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Single-cell RNA sequencing of adult primate neocortex reveals the regulatory dynamics of neural plasticity

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机构: [1]Capital Med Univ, Beijing Tongren Eye Ctr, Beijing Tongren Hosp, 1 Dongjiaominxiang St, Beijing 100730, Peoples R China [2]Sun Yat Sen Univ, Zhongshan Ophthalm Ctr, State Key Lab Ophthalmol, Guangzhou, Guangdong, Peoples R China
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关键词: Neuronal plasticity primary visual cortex Sc-RNA-seq

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Objectives: To investigate gene expression dynamics in adult primate neocortex and elucidate the molecular basis of these capabilities. Methods: Whole-cell transcriptome data from primary visual cortex (V1) of cynomolgus monkeys were analyzed, focusing on inhibitory neurons derived from the medial ganglionic eminence. Using RNA velocity and scVelo algorithms, we investigated subtle gene expression shifts, identified key driver genes, and conducted functional enrichment analysis. Results: Our analysis revealed that somatostatin (SST)+ neurons are generated prior to parvalbumin (PVALB)+ neurons, with gene expression trajectories resembling those observed in developing animals. However, certain well-established SST+ and PVALB+ neurons, such as long-projecting SST+ chondrolectin (CHODL)+ neurons and PVALB+ unc-5 netrin receptor B (UNC5B)+ neurons, do not share the same lineage, suggesting distinct regulatory programs. Furthermore, we identified a set of genes strongly correlated with these trajectories, including dihydropyrimidinase like 3 (DPYSL3), osteocrin (OSTN), smoothelin (SMTN), meis homeobox 2 (MEIS2), chromodomain helicase DNA binding protein 3 (CHD3), and chromodomain helicase DNA binding protein 5 (CHD5). Functional enrichment analysis suggested that these genes are associated with neural plasticity and axon growth. Conclusions: This study provides novel insights into the gene expression dynamics of the primate neocortex. Genes involved in neuronal development and plasticity may underlie the advanced informationprocessing capabilities in primates.

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出版当年[2025]版:
大类 | 4 区 医学
小类 | 4 区 医学:研究与实验 4 区 肿瘤学
最新[2025]版:
大类 | 4 区 医学
小类 | 4 区 医学:研究与实验 4 区 肿瘤学
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出版当年[2023]版:
Q3 MEDICINE, RESEARCH & EXPERIMENTAL Q4 ONCOLOGY
最新[2023]版:
Q3 MEDICINE, RESEARCH & EXPERIMENTAL Q4 ONCOLOGY

影响因子: 最新[2023版] 最新五年平均 出版当年[2023版] 出版当年五年平均 出版前一年[2022版]

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第一作者机构: [1]Capital Med Univ, Beijing Tongren Eye Ctr, Beijing Tongren Hosp, 1 Dongjiaominxiang St, Beijing 100730, Peoples R China
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