机构:[1]Shanghai Jiao Tong Univ, Sch Med, Chinese Minist Educ,Fac Basic Med, Hongqiao Int Inst Med,Shanghai Tongren Hosp,Key L, Shanghai, Peoples R China[2]Nanjing Med Univ, Fac Basic Med, Nanjing, Jiangsu, Peoples R China[3]Southeast Univ, Therapeut Antibody Res Ctr SEU Alphamab, Nanjing, Jiangsu, Peoples R China
Monoclonal antibodies targeting PD-1/PD-L1 signaling pathway have achieved unprecedented success in cancer treatment over the last few years. Atezolizumab is the first PD-L1 monoclonal antibody approved by US FDA for cancer therapy; however the molecular basis of atezolizumab in blocking PD-1/PD-L1 interaction is not fully understood. Here we have solved the crystal structure of PD-L1/atezolizumab complex at 2.9 angstrom resolution. The structure shows that atezolizumab binds the front beta-sheet of PD-L1 through three CDR loops from the heavy chain and one CDR loop from the light chain. The binding involves extensive hydrogen-bonding and hydrophobic interactions. Notably there are multiple aromatic residues from the CDR loops forming Pi-Pi stacking or cation-Pi interactions within the center of the binding interface and the buried surface area is more than 2000 angstrom(2), which is the largest amongst all the known PD-L1/antibody structures. Mutagenesis study revealed that two hot-spot residues (E58, R113) of PD-L1 contribute significantly to the binding of atezolizumab. The structure also shows that atezolizumab binds PD-L1 with a distinct heavy and light chain orientation and it blocks PD-1/PD-L1 interaction through competing with PD-1 for the same PD-L1 surface area. Taken together, the complex structure of PD-L1/atezolizumab solved here revealed the molecular mechanism of atezolizumab in immunotherapy and provides basis for future monoclonal antibody optimization and rational design of small chemical compounds targeting PD-L1 surface.
基金:
National Natural Science Foundation of ChinaNational Natural Science Foundation of China (NSFC) [31370727, 31170724, 81502981, 81572090]; National Basic Research Program of China (973 Program)National Basic Research Program of China [2014CB910304]; Shanghai Municipal Education CommissionShanghai Municipal Education Commission (SHMEC) [12ZZ113]