高级检索
当前位置: 首页 > 详情页

Multi-ancestry genome-wide association analyses incorporating SNP-by-psychosocial interactions identify novel loci for serum lipids

文献详情

资源类型:
Pubmed体系:

收录情况: ◇ SCIE

作者:
机构: [1]Center for Research on Genomics and Global Health, National Human Genome Research Institute, Bethesda, MD, 20892, USA. [2]Department of Epidemiology, School of Public Health, The University of Texas Health Science Center at Houston, Houston, TX, 77030, USA. [3]MerexAgRight Farm, Ltd., Kitale, Kenya. [4]Division of Statistical Genomics, Washington University, St. Louis, MO, USA. [5]Department of Epidemiology, University of Regensburg, Regensburg, 93051, Germany. [6]Department of Social Medicine, Population and Public Health, University of California, Riverside School of Medicine, Riverside, CA, 92521, USA. [7]Novo Nordisk Foundation Center for Basic Metabolic Research, University of Copenhagen, Copenhagen, DK-2200, Denmark. [8]The Novo Nordisk Foundation Center for Genomic Mechanisms of Disease, Broad Institute of MIT and Harvard, Cambridge, MA, 02142, USA. [9]Institut Pasteur, Universite Paris Cite, Department of Computational Biology, F-75015, Paris, France. [10]Department of Epidemiology, Harvard School of Public Health, Boston, MA, 02115, USA. [11]Department of Biostatistics, University of Washington, Seattle, WA, 98101, USA. [12]Department of Epidemiology, School of Public Health, University of Michigan, Ann Arbor, MI, 48109, USA. [13]Saw Swee Hock School of Public Health, National University of Singapore and National University Health System, Singapore, Singapore, 117549, Singapore. [14]Department of Engineering Technology, University of Houston, Sugar Land, TX, 77479, USA. [15]Department of Epidemiology, University of North Carolina, Chapel Hill, NC, 27516, USA. [16]Department of Pediatrics, The Institute for Translational Genomics and Population Sciences, The Lundquist Institute for Biomedical Innovation at Harbor-UCLA Medical Center, Torrance, CA, 90502, USA. [17]Department of Epidemiology, Federal University of Pelotas, Pelotas, RS, 96020-220, Brazil. [18]Heart Institute (InCor), University of Sao Paulo Medical School, Sao Paulo, SP, 05403-900, Brazil. [19]Department of Biostatistics, Boston University, Boston, MA, 02118, USA. [20]Department of Medicine, Division of Cardiology, Duke University School of Medicine, Durham, NC, 27701-2047, USA. [21]Clinical and Translational Epidemiology Unit, Massachusetts General Hospital, Boston, MA, 02114, USA. [22]Department of Medicine, Harvard Medical School, Boston, MA, 02115, USA. [23]Department of Epidemiology, University of Groningen, University Medical Center Groningen, Groningen, 9713 GZ, The Netherlands. [24]Department of Internal Medicine, Section of Gerontology and Geriatrics, Leiden University Medical Center, Leiden, 2333ZA, the Netherlands. [25]McGovern Medical School, University of Texas Health Science Center at Houston, Houston, TX, 77030, USA. [26]Department of Pediatrics, Baylor College of Medicine, Houston, TX, 77030, USA. [27]Department of Biostatistics, School of Public Health, University of Michigan, Ann Arbor, MI, 48109, USA. [28]Division of Biostatistics, Washington University, St. Louis, MO, 63110, USA. [29]Department of Epidemiology, Erasmus MC University Medical Center, Rotterdam, the Netherlands. [30]Department of Biomedical Data Sciences, Leiden University Medical Center, Leiden, 2300 RC, The Netherlands. [31]IQVIA, 1101 CT, Amsterdam, the Netherlands. [32]Social, Genetic, and Developmental Psychiatry Centre, Institute of Psychiatry, Psychology and Neuroscience, King's College London, London, UK. [33]Lothian Birth Cohorts, Department of Psychology, The University of Edinburgh, Edinburgh, EH8 9JZ, UK. [34]Department of Clinical Chemistry, Fimlab Laboratories, Tampere, 33520, Finland. [35]Department of Clinical Chemistry, Finnish Cardiovascular Research Center - Tampere, Faculty of Medicine and Health Technology, Tampere University, Tampere, 33014, Finland. [36]Department of Psychiatry, Lausanne University Hospital and University of Lausanne, Prilly, Vaud, 1008, Switzerland. [37]Foundation for Research in Health Exercise and Nutrition, Kuopio Research Institute of Exercise Medicine, Kuopio, 70100, Finland. [38]Survey Research Center, Institute for Social Research, University of Michigan, Ann Arbor, MI, 48104, USA. [39]Interfaculty Institute of Genetics and Functional Genomics, University Medicine Greifswald, Greifswald, 17489, Germany. [40]German Center for Cardiovascular Research (DZHK), partner site Greifswald, Greifswald, 17475, Germany. [41]Division of Epidemiology, Vanderbilt University Medical Center, Nashville, TN, 37203, USA. [42]Department of Medicine, Johns Hopkins University School of Medicine, Baltimore, MD, 21287, USA. [43]McKusick-Nathans Institute, Department of Genetic Medicine, Johns Hopkins University School of Medicine, Baltimore, MD, 21287, USA. [44]Department of Epidemiology and Biostatistics, Arnold School of Public Health, University of South Carolina, Columbia, SC, 29169, USA. [45]Section of Cardiovascular Research, Baylor College of Medicine, Houston, TX, 77030, USA. [46]Houston Methodist Debakey Heart and Vascular Center, Houston, TX, 77030, USA. [47]Human Genome Sequencing Center, Baylor College of Medicine, Houston, TX, 77030, USA. [48]Institute for Minority Health Research, University of Illinois Chicago, Chicago, IL, 60612, USA. [49]Center for Biostatistics and Data Science, Institute for Informatics, Data Science, and Biostatistics (I2BD), Washington University School of Medicine, St. Louis, MO, 63110, USA. [50]Division of Cardiology, Washington University, St. Louis, MO, 63110, USA. [51]Department of Epidemiology, University of Washington, Seattle, WA, USA. [52]Department of Medicine, University of Washington, Seattle, WA, USA. [53]Cardiovascular Health Research Unit, University of Washington, Seattle, WA, USA. [54]College of Pharmacy, University of Manitoba, Winnipeg, MB, R3E 0T5, Canada. [55]Department of Medicine, University of Mississippi Medical Center, Jackson, MS, 39213, USA. [56]Department of Psychology, San Diego State University, San Diego, CA, USA. [57]Institute of Biomedicine, School of Medicine, University of Eastern Finland, Kuopio Campus, Kuopio, 70100, Finland. [58]Department of Epidemiology and Population Health, Albert Einstein College of Medicine, Bronx, NY, USA. [59]Institute of Molecular and Clinical Ophthalmology Basel IOB, Basel, Switzerland. [60]Beijing Institute of Ophthalmology, Beijing Tongren Eye Center, Beijing Ophthalmology and Visual Science Key Lab, Beijing Tongren Hospital, Capital Medical University, Beijing, China. [61]Department of Psychology and Logopedics, University of Helsinki, Helsinki, 00014, Finland. [62]University of Mississippi Medical Center, Jackson, MS, 39213, USA. [63]Laboratory of Epidemiology and Population Sciences, National Institute on Aging, National Institutes of Health, Baltimore, MD, 21224, USA. [64]Genome Institute of Singapore, Agency for Science, Technology and Research, Singapore, Singapore, 138672, Singapore. [65]Department of Medicine, Duke Molecular Physiology Institute Duke University School of Medicine, Durham, NC, 27701-2047, USA. [66]Center for Public Health Genomics, University of Virginia, Charlottesville, VA, 22908, USA. [67]Department of Public Health Sciences, University of Virginia, Charlottesville, VA, USA. [68]Department of Biochemistry and Molecular Genetics, University of Virginia, Charlottesville, VA, USA. [69]Department of Medicine, Internal Medicine, Lausanne University Hospital and University of Lausanne, Rue du Bugnon 46, CH- 1011, Lausanne, Switzerland. [70]Department of Psychiatry, Amsterdam Neuroscience and Amsterdam Public Health Research Institute, Amsterdam UMC, Vrije Universiteit Amsterdam, Amsterdam, 1081 HJ, the Netherlands. [71]Veritas Management Group, Inc., Alpharetta, GA, 30072, USA. [72]Division of Endocrinology, Diabetes, and Nutrition, University of Maryland School of Medicine, Baltimore, MD, USA. [73]Division of Epidemiology and Community Health, University of Minnesota, Minneapolis, MN, USA. [74]Department of Health Services Research, School of Medicine and Health Services, Carl von Ossietzky Universitat Oldenburg, Oldenburg, 26111, Germany. [75]Institute for Health Economics and Health Care Management, Helmholtz Zentrum Munchen, German Research Center for Environmental Health, Neuherberg, 85764, Germany. [76]Division of Preventive Medicine, Heersink School of Medicine, University of Alabama at Birmingham, Birmingham, AL, 35205, USA. [77]Cardiovascular Health Research Unit, Division of Cardiology, University of Washington, Seattle, Washington, 98195, USA. [78]Yong Loo Lin School of Medicine, National University of Singapore and National University Health System, Singapore, Singapore, 119228, Singapore. [79]Department of Pediatrics, LA Biomed at Harbor-UCLA Medical Center, Torrance, CA, 90502, USA. [80]Public Health Sciences, Fred Hutchinson Cancer Center, Seattle, WA, 98109, USA. [81]Laboratory Medicine and Pathology, University of Minnesota, Minneapolis, MN, 55455, USA. [82]Department of Internal Medicine, Erasmus MC, University Medical Center, Rotterdam, The Netherlands. [83]Nuffield Department of Population Health, University of Oxford, Oxford, UK. [84]Research Unit Molecular Epidemiology, Institute of Epidemiology, Helmholtz Zentrum Munchen, German Research Center for Environmental Health, Neuherberg, 85764, Germany. [85]Department of Epidemiology, University of Iowa College of Public Health, Iowa City, IA, USA. [86]Beijing Tongren Eye Center, Beijing Key Laboratory of Intraocular Tumor Diagnosis and Treatment, Beijing Ophthalmology and Visual Sciences Key Laboratory, Beijing Tongren Hospital, Capital Medical University, Beijing, China. [87]Department of Human Genetics, Leiden University Medical Center, Leiden, 2333ZA, The Netherlands. [88]Department of Internal Medicine, Division of Endocrinology, Leiden University Medical Center, Leiden, 2333ZA, The Netherlands. [89]School of Public Health, Jackson State University, Jackson, MS, 39213, USA. [90]Department of Population and Quantitative Health Sciences, Case Western Reserve University, Cleveland, OH, 44106, USA. [91]Institute of Epidemiology, Helmholtz Zentrum Munchen, German Research Center for Environmental Health, Neuherberg, 85764, Germany. [92]German Center for Diabetes Research (DZD), Partner Munchen-Neuherberg, Neuherberg, Germany. [93]German Centre for Neurodegenerative Diseases (DZNE), Site Rostock/Greifswald, Greifswald, 17475, Germany. [94]Department of Psychiatry and Psychotherapy, University Medicine Greifswald, Greifswald, 17489, Germany. [95]Department of Clinical Physiology and Nuclear Medicine, Kuopio University Hospital, Kuopio, Finland. [96]Department of Psychiatry, University of Groningen, University Medical Center Groningen, Groningen, 9713 GZ, the Netherlands. [97]Division of Biostatistics, Department of Population and Public Health Sciences, University of Southern California, Los Angeles, CA, 90032, USA. [98]Icelandic Heart Association, Icelandic Heart Association, Kopavogur, 201, Iceland. [99]Faculty of Medicine, University of Iceland, Reykjavik, Iceland. [100]Postgraduate Program in Epidemiology, Federal University of Pelotas, Pelotas, RS, 96020-220, Brazil. [101]Department of Clinical Epidemiology, Leiden University Medical Center, Leiden, 2333ZA, the Netherlands. [102]Department of Public Health and Primary Care, Leiden University Medical Center, Leiden, 2333ZA, the Netherlands. [103]Cardiovascular Health Research Unit, Departments of Medicine, Epidemiology, and Health Systems and Population Health, University of Washington, Seattle, USA. [104]Department of Psychiatry, Washington University School of Medicine, St. Louis, MO, 63110, USA. [105]Center for Research on Genomics and Global Health, National Human Genome Research Institute, Bethesda, MD, 20892, USA.
出处:

摘要:
Serum lipid levels, which are influenced by both genetic and environmental factors, are key determinants of cardiometabolic health and are influenced by both genetic and environmental factors. Improving our understanding of their underlying biological mechanisms can have important public health and therapeutic implications. Although psychosocial factors, including depression, anxiety, and perceived social support, are associated with serum lipid levels, it is unknown if they modify the effect of genetic loci that influence lipids. We conducted a genome-wide gene-by-psychosocial factor interaction (G×Psy) study in up to 133,157 individuals to evaluate if G×Psy influences serum lipid levels. We conducted a two-stage meta-analysis of G×Psy using both a one-degree of freedom (1df) interaction test and a joint 2df test of the main and interaction effects. In Stage 1, we performed G×Psy analyses on up to 77,413 individuals and promising associations (P < 10-5) were evaluated in up to 55,744 independent samples in Stage 2. Significant findings (P < 5 × 10-8) were identified based on meta-analyses of the two stages. There were 10,230 variants from 120 loci significantly associated with serum lipids. We identified novel associations for variants in four loci using the 1df test of interaction, and five additional loci using the 2df joint test that were independent of known lipid loci. Of these 9 loci, 7 could not have been detected without modeling the interaction as there was no evidence of association in a standard GWAS model. The genetic diversity of included samples was key in identifying these novel loci: four of the lead variants displayed very low frequency in European ancestry populations. Functional annotation highlighted promising loci for further experimental follow-up, particularly rs73597733 (MACROD2), rs59808825 (GRAMD1B), and rs11702544 (RRP1B). Notably, one of the genes in identified loci (RRP1B) was found to be a target of the approved drug Atenolol suggesting potential for drug repurposing. Overall, our findings suggest that taking interaction between genetic variants and psychosocial factors into account and including genetically diverse populations can lead to novel discoveries for serum lipids.© 2025. This is a U.S. Government work and not under copyright protection in the US; foreign copyright protection may apply.

基金:
语种:
WOS:
PubmedID:
中科院(CAS)分区:
出版当年[2025]版:
大类 | 2 区 医学
小类 | 2 区 精神病学
最新[2025]版:
大类 | 2 区 医学
小类 | 2 区 精神病学
JCR分区:
出版当年[2023]版:
Q1 PSYCHIATRY
最新[2024]版:
Q1 PSYCHIATRY

影响因子: 最新[2024版] 最新五年平均 出版当年[2023版] 出版当年五年平均 出版前一年[2022版] 出版后一年[2024版]

第一作者:
第一作者机构: [1]Center for Research on Genomics and Global Health, National Human Genome Research Institute, Bethesda, MD, 20892, USA.
共同第一作者:
通讯作者:
推荐引用方式(GB/T 7714):
APA:
MLA:

资源点击量:28499 今日访问量:0 总访问量:1584 更新日期:2025-09-01 建议使用谷歌、火狐浏览器 常见问题

版权所有©2020 首都医科大学附属北京同仁医院 技术支持:重庆聚合科技有限公司 地址:北京市东城区东交民巷1号(100730)