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Semantic Reasoning with NLI for Assertion Detection in Medical Text

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机构: [1]Beijing Univ Posts & Telecommun, State Key Lab Networking & Switching Technol, Beijing 100876, Peoples R China [2]Tsinghua Univ, Dept Comp Sci & Technol, Beijing 100084, Peoples R China [3]Capital Med Univ, Beijing Inst Ophthalmol, Beijing Tongren Hosp, Beijing 100005, Peoples R China [4]Beijing Univ Posts & Telecommun, Sch Cyberspace Secur, Beijing 100876, Peoples R China [5]Peng Cheng Lab, Dept Math & Theories, Shenzhen 518055, Peoples R China
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关键词: Assertion detection Electronic medical records Natural language inference Knowledge

摘要:
Assertion information is of crucial importance for constructing an intelligent diagnosis system as it contains clinical findings and decision basis of clinicians in the electronic medical records (EMRs), e.g., whether a symptom is present or not. Current work mainly treats assertion detection as a sequence labeling task, or constructs rule-based methods. However, there is a challenge that to detect assertions embedded in the context with long-range dependencies, needs considering the whole text to capture the complex linguistic and underlying semantic information. To tackle the above issues, we consider assertion detection as a semantic reasoning task based on natural language inference (NLI). First, we generate candidate spans with boundary detection on the basis of which we can enrich the training corpus with external knowledge such as assertion definitions. Then we detect the assertions through the NLI-based classification. To the best of our knowledge, we build the first Chinese assertion dataset, which contains 4237 sentences on privacy de-identified ophthalmology remote reading reports. Extensive experiments demonstrate that our proposed method achieves the best results on both of the English dataset i2b2 and the Chinese privacy dataset.

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第一作者机构: [1]Beijing Univ Posts & Telecommun, State Key Lab Networking & Switching Technol, Beijing 100876, Peoples R China
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通讯机构: [1]Beijing Univ Posts & Telecommun, State Key Lab Networking & Switching Technol, Beijing 100876, Peoples R China [5]Peng Cheng Lab, Dept Math & Theories, Shenzhen 518055, Peoples R China
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