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Common variants near ABCA1 and in PMM2 are associated with primary open-angle glaucoma

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机构: [1]Department of Ophthalmology and Visual Science, Eye and Ear Nose Throat (ENT) Hospital, Shanghai Medical School, Fudan University, Shanghai, China [2]SichuanProvincial Key Laboratory for Human Disease Gene Study, Hospital of the University of Electronic Science and Technology of China and Sichuan Provincial People’sHospital, Chengdu, China [3]School of Medicine, University of Electronic Science and Technology of China, Chengdu, China [4]Singapore Eye Research Institute,Singapore National Eye Centre, Singapore [5]Department of Ophthalmology, National University Health System and National University of Singapore, Singapore [6]Beijing Ophthalmology and Visual Sciences Key Laboratory, Beijing Tongren Eye Centre, Beijing Tongren Hospital, Capital Medical University, Beijing, China [7]China Key Laboratory of Dermatology, Anhui Medical University, Ministry of Education, Hefei, China [8]Department of Ophthalmology and Visual Sciences,The Chinese University of Hong Kong, Hong Kong, China [9]Department of Ophthalmology, Sichuan Academy of Medical Sciences and Sichuan Provincial People’sHospital, Chengdu, China [10]West High School, Salt Lake City, Utah, USA [11]Human Genetics, Genome Institute of Singapore, Singapore [12]State Key Laboratory ofMedical Neurobiology, Institutes of Brain Science, Fudan University, Shanghai, China [13]Myopia Key Laboratory of the Ministry of Health of China, Shanghai, China [14]Sichuan Translational Medicine Hospital, Chinese Academy of Sciences, Chengdu, China
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We performed a genome-wide association study for primary open-angle glaucoma (POAG) in 1,007 cases with high-pressure glaucoma (HPG) and 1,009 controls from southern China. We observed genome-wide significant association at multiple SNPs near ABCA1 at 9q31.1 (rs2487032; P = 1.66 x 10(-8)) and suggestive evidence of association in PMM2 at 16p13.2 (rs3785176; P= 3.18 x 10(-6)). We replicated these findings in a set of 525 HPG cases and 912 controls from Singapore and a further set of 1,374 POAG cases and 4,053 controls from China. We observed genome-wide significant association with more than one SNP at the two loci (P = 2.79 x 10(-19) for rs2487032 representing ABCA1 and P = 5.77 x 10(-10) for rs3785176 representing PMM2). Both ABCA1 and PMM2 are expressed in the trabecular meshwork, optic nerve and other ocular tissues. In addition, ABCA1 is highly expressed in the ganglion cell layer of the retina, a finding consistent with it having a role in the development of glaucoma.

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出版当年[2013]版:
大类 | 1 区 生物
小类 | 1 区 遗传学
最新[2025]版:
大类 | 1 区 生物学
小类 | 1 区 遗传学
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出版当年[2012]版:
Q1 GENETICS & HEREDITY
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Q1 GENETICS & HEREDITY

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第一作者机构: [1]Department of Ophthalmology and Visual Science, Eye and Ear Nose Throat (ENT) Hospital, Shanghai Medical School, Fudan University, Shanghai, China
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通讯机构: [1]Department of Ophthalmology and Visual Science, Eye and Ear Nose Throat (ENT) Hospital, Shanghai Medical School, Fudan University, Shanghai, China [2]SichuanProvincial Key Laboratory for Human Disease Gene Study, Hospital of the University of Electronic Science and Technology of China and Sichuan Provincial People’sHospital, Chengdu, China [3]School of Medicine, University of Electronic Science and Technology of China, Chengdu, China [12]State Key Laboratory ofMedical Neurobiology, Institutes of Brain Science, Fudan University, Shanghai, China [13]Myopia Key Laboratory of the Ministry of Health of China, Shanghai, China [14]Sichuan Translational Medicine Hospital, Chinese Academy of Sciences, Chengdu, China
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