机构:[1]Institute of Developmental and Regenerative Biology, Hangzhou Normal University, Jianggan, Hangzhou, Zhejiang, China[2]Human Genome Sequencing Center, Baylor College of Medicine, Houston, Texas, United States[3]Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas, United States[4]Department of Ophthalmology, Peking Union Medical College Hospital, Peking Union Medical College, Dongcheng, Beijing, China[5]Structural and Computational Biology & Molecular Biophysics, Baylor College of Medicine, Houston, Texas, United States
Leber congenital amaurosis (LCA) is an inherited retinal disease that causes early-onset severe visual impairment. To evaluate the mutation spectrum in the Chinese population, we performed a mutation screen in 145 Chinese LCA families.First, we performed direct Sanger sequencing of 7 LCA disease genes in 81 LCA families. Next, we developed a capture panel that enriches the entire coding exons and splicing sites of 163 known retinal disease genes and other candidate retinal disease genes. The capture panel allowed us to quickly identify disease-causing mutations in a large number of genes at a relatively low cost. Thus, this method was applied to the 53 LCA families that were unsolved by direct Sanger sequencing of 7 LCA disease genes and an additional 64 LCA families. Systematic next-generation sequencing (NGS) data analysis, Sanger sequencing validation, and segregation analysis were used to identify pathogenic mutations.Homozygous or compound heterozygous mutations were identified in 107 families, heterozygous autosomal dominant mutations were identified in 3 families and an X-linked mutation was found in 1 family, for a combined solving rate of 76.6%. In total, 136 novel pathogenic mutations were found in this study. In combination with two previous studies carried out in Chinese LCA patients, we concluded that the mutation spectrum in the Chinese population is distinct compared to that in the European population. After revisiting, we also refined the clinical diagnosis of 10 families based on their molecular diagnosis.Our results highlight the importance of a molecular diagnosis as an integral part of the clinical diagnostic process.
基金:
National Institutes of Health (NIH; Bethesda, MD,
USA) Shared Instrument Grant 1S10RR026550 (RC); Grants
31471196 (HW) and 81470669 (RS) from the National Natural
Science Foundation of China; Grants CD-CL-0808-0470-PUMCH
and CD-CL-0214-0631-PUMCH from the Foundation Fighting
Blindness USA (RS); Grant 2010DFB33430 from the Ministry of
Science and Technology of the People’s Republic of China (RS);
Grant BR-GE-0613-0618-BCM from the Retinal Research Foundation, Foundation Fighting Blindness; and Grants R01EY022356,
EY020540, and R01EY018571 from the National Eye Institute
(Bethesda, MD, USA; RC).
语种:
外文
PubmedID:
中科院(CAS)分区:
出版当年[2014]版:
大类|2 区医学
小类|2 区眼科学
最新[2023]版:
大类|2 区医学
小类|2 区眼科学
第一作者:
第一作者机构:[1]Institute of Developmental and Regenerative Biology, Hangzhou Normal University, Jianggan, Hangzhou, Zhejiang, China[*1]Institute of Developmental and Regenerative Biology, Hangzhou Normal University, Zhejiang, 310036 China
共同第一作者:
通讯作者:
通讯机构:[1]Institute of Developmental and Regenerative Biology, Hangzhou Normal University, Jianggan, Hangzhou, Zhejiang, China[2]Human Genome Sequencing Center, Baylor College of Medicine, Houston, Texas, United States[3]Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas, United States[4]Department of Ophthalmology, Peking Union Medical College Hospital, Peking Union Medical College, Dongcheng, Beijing, China[5]Structural and Computational Biology & Molecular Biophysics, Baylor College of Medicine, Houston, Texas, United States[*1]Institute of Developmental and Regenerative Biology, Hangzhou Normal University, Zhejiang, 310036 China[*2]Department of Ophthalmology, Peking Union Medical College Hospital, Peking Union Medical College, Beijing, 100730 China[*3]Human Genome Sequencing Center, Baylor College of Medicine, Houston, TX 77030, USA
推荐引用方式(GB/T 7714):
Hui Wang,Xia Wang,Xuan Zou,et al.Comprehensive Molecular Diagnosis of a Large Chinese Leber Congenital Amaurosis Cohort.[J].Investigative ophthalmology & visual science.2015,56(6):3642-55.doi:10.1167/iovs.14-15972.
APA:
Hui Wang,Xia Wang,Xuan Zou,Shan Xu,Hui Li...&Ruifang Sui.(2015).Comprehensive Molecular Diagnosis of a Large Chinese Leber Congenital Amaurosis Cohort..Investigative ophthalmology & visual science,56,(6)
MLA:
Hui Wang,et al."Comprehensive Molecular Diagnosis of a Large Chinese Leber Congenital Amaurosis Cohort.".Investigative ophthalmology & visual science 56..6(2015):3642-55