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Effects of chronic PM2.5 exposure on pulmonary epithelia: Transcriptome analysis of mRNA-exosomal miRNA interactions

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机构: [1]Shanghai Jiao Tong Univ, Tongren Hosp, Sch Med, 1111 Xianxia Rd, Shanghai 200336, Peoples R China [2]Shanghai Jiao Tong Univ, Fac Publ Hlth, Sch Med, 227 South Chongqing Rd, Shanghai 200025, Peoples R China [3]Fudan Univ, Inst Biomed Sci, Shanghai 200032, Peoples R China
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关键词: PM2 5 Exosome Pulmonary diseases Micro-RNA Bioinformatics In vitro toxicity

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Epidemiological studies have established the correlations between PM2.5 and a wide variety of pulmonary diseases. However, their underlying pathogeneses have not been clearly elucidated yet. In the present study, the epithelial-mesenchymal transition (EMT) phenotype with enhanced proliferation and migration activity of human pulmonary epithelial cell line BEAS-2B was observed after exposure to low dose PM2.5 exposure (50 mu g/ ml) for 30 passages. Then, epithelial cells derived-exosomal micro-RNA (miRNA) and intracellular total RNA were extracted, and the differentially expressed exosomal miRNAs (DE-Exo-MiRs) as well as differentially expressed protein coding genes (DEGs) were identified by RNA sequencing (RNA-seq) and transcriptome analysis. We found that chronic PM2.5 exposure stimulated the release of pulmonary epithelium derived exosomes. 45 DE-Exo-MiRs including 32 novelly predicted miRNAs and 843 DEGs between PM2.5 exposed group and the normal control were detected. The Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analyses showed that DEGs were significantly enriched in extracellular matrix organization, focal adhesion and cancer related terms. Besides, the enrichment analyses on 7774 mRNA targets of 27 DE-Exo-MiRs predicted by MiRanda software also revealed the potential regulatory role of exosomal miRNAs in pathways in cancer, Wingless/Integrated (Wnt) signaling pathway, focal adhesion related genes and other multiple pathogenic pathways. Moreover, the interactive exosomal miRNA-mRNA pair networks were constructed using Cytoscape software. Our results provided a novel basis for a better understanding of the mechanisms of chronic PM2.5 exposure induced pulmonary disorders including pulmonary fibrosis and cancer, in which exosomal miRNAs (Exo-MiRs) potentially functions by dynamically regulating gene expressions.

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出版当年[2018]版:
大类 | 2 区 医学
小类 | 2 区 毒理学
最新[2025]版:
大类 | 3 区 医学
小类 | 3 区 毒理学
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出版当年[2017]版:
Q2 TOXICOLOGY
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Q2 TOXICOLOGY

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第一作者机构: [2]Shanghai Jiao Tong Univ, Fac Publ Hlth, Sch Med, 227 South Chongqing Rd, Shanghai 200025, Peoples R China
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通讯机构: [1]Shanghai Jiao Tong Univ, Tongren Hosp, Sch Med, 1111 Xianxia Rd, Shanghai 200336, Peoples R China [2]Shanghai Jiao Tong Univ, Fac Publ Hlth, Sch Med, 227 South Chongqing Rd, Shanghai 200025, Peoples R China [*1]Faculty of Public Health, Shanghai Jiao Tong University School of Medicine, No.227 South Chongqing Road, Shanghai, China. [*2]Tongren Hospital, Shanghai Jiao Tong University School of Medicine, No.1111 Xianxia Road, Shanghai, China
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