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Diagnostic efficacy of targeted high-throughput sequencing for lower respiratory infection in preterm infants

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机构: [1]Department of Neonatology, Children's Hospital of Fudan University, National Children's Medical Center Shanghai, China. [2]Geriatrics Department, Tong Ren Hospital, Shanghai Jiao Tong University School of Medicine Shanghai, China.
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关键词: Targeted next-generation sequencing multiplex PCR respiratory infectious disease preterm infant pathogen detection diagnosis

摘要:
To examine the pathogen diagnostic performance of targeted high-throughput next-gen sequencing (tNGS) in respiratory infectious diseases in preterm infants using dynamic follow-up.Clinical samples of respiratory secretions were consecutively collected from 20 preterm infants weekly for 5 weeks, during which 10 developed bronchopulmonary dysplasia. Pathogen identification from these collected specimens was performed by both conventional cultivation and tNGS.We found that targeted next-generation sequencing shared a 90.9% full or partial consistency for lower respiratory pathogen detection with the traditional culture-based approach, and increased the detection rate by 105.9%. Moreover, most of the pathogens identified by tNGS were diminished in patients after treatment.This study reveals the high sensitivity and performance of targeted high-throughput sequencing for respiratory infectious disease diagnosis and pathogen identification. The trial registry number is NCT03850457, and the trial URL is https://clinicaltrials.gov/ct2/show/NCT03850457.AJTR Copyright © 2022.

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出版当年[2021]版:
大类 | 3 区 医学
小类 | 4 区 肿瘤学 4 区 医学:研究与实验
最新[2023]版:
大类 | 4 区 医学
小类 | 4 区 医学:研究与实验 4 区 肿瘤学
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出版当年[2020]版:
Q2 MEDICINE, RESEARCH & EXPERIMENTAL Q3 ONCOLOGY
最新[2023]版:
Q3 MEDICINE, RESEARCH & EXPERIMENTAL Q4 ONCOLOGY

影响因子: 最新[2023版] 最新五年平均 出版当年[2020版] 出版当年五年平均 出版前一年[2019版] 出版后一年[2021版]

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第一作者机构: [1]Department of Neonatology, Children's Hospital of Fudan University, National Children's Medical Center Shanghai, China.
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通讯机构: [1]Department of Neonatology, Children's Hospital of Fudan University, National Children's Medical Center Shanghai, China. [*1]Department of Neonatology, Children’s Hospital of Fudan University, National Children’s Medical Center, No. 399 Wanyuan Road, Shanghai, China
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